Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107588197Coiled-coil domain-containing protein 105-like. (464 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
   
 0.991
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.991
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.991
LOC107555153
Small subunit ribosomal protein S30e.
   
 0.991
ENSSGRP00000016306
Ribosomal protein S17.
   
 0.981
LOC107549111
Small subunit ribosomal protein S7e.
   
 0.981
LOC107567169
28S ribosomal protein S12, mitochondrial-like.
  
 0.979
LOC107552847
Small subunit ribosomal protein S9e.
  
 0.975
LOC107567812
40S ribosomal protein S18-like.
  
 0.975
LOC107552847-2
40S ribosomal protein S9.
  
 0.975
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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