Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSGRP00000011523Ras homolog family member T2. (613 aa)    
Predicted Functional Partners:
prkn
E3 ubiquitin-protein ligase parkin.
    
 0.967
ENSSGRP00000110934
Parkin RBR E3 ubiquitin protein ligase.
    
 0.967
LOC107574490
Mitochondrial import receptor subunit TOM70-like.
   
 0.926
ENSSGRP00000032553
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 0.926
USP15
Ubiquitin carboxyl-terminal hydrolase 15 isoform X1.
     
 0.918
ENSSGRP00000107038
Mitochondrial ubiquitin ligase activator of nfkb 1-A-like.
   
 
 0.917
ENSSGRP00000079987
Next to BRCA1 gene 1 protein-like.
     
  0.910
USP30
Ubiquitin carboxyl-terminal hydrolase 30-like.
     
 0.900
USP30-2
Ubiquitin specific peptidase 30.
     
 0.900
ENSSGRP00000018824
annotation not available
  
 0.890
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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