Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011528WD repeat domain 90. (1712 aa)    
Predicted Functional Partners:
ENSSGRP00000096504
Nucleoside diphosphate kinase, mitochondrial-like.
   
 0.949
LOC107583491
Parkin coregulated gene protein homolog.
    
 
 0.923
LOC107590953
Parkin coregulated gene protein homolog.
    
 
 0.923
ENSSGRP00000007779
annotation not available
    
 
 0.915
LOC107574706
Enkurin-like.
    
 
 0.909
LOC107588018
Enkurin-like.
    
 
 0.909
EFHC1
EF-hand domain-containing protein 1-like.
    
 
 0.901
efhc2
EF-hand domain-containing family member C2.
    
 
 0.901
ENSSGRP00000111375
EF-hand domain-containing protein 1-like.
    
 
 0.901
LOC107597116
Axonemal dynein light intermediate polypeptide 1-like.
    
 
 0.885
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (22%) [HD]