STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107586894Lysosomal thioesterase PPT2-like. (310 aa)    
Predicted Functional Partners:
lias
Lipoic acid synthetase.
     
 0.626
ENSSGRP00000023512
Helicase SKI2W-like.
    
 
 0.608
LOC107599340
39S ribosomal protein L12, mitochondrial-like.
  
   0.592
ENSSGRP00000011646
annotation not available
    
   0.580
Mrpl21
39S ribosomal protein L21, mitochondrial.
    
   0.580
cmbl
Carboxymethylenebutenolidase homolog.
  
  
 0.578
MRPL49
39S ribosomal protein L49, mitochondrial.
    
   0.558
LOC107580894
39S ribosomal protein L49, mitochondrial-like.
    
   0.558
acox1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
      
 0.518
Mrpl27
39S ribosomal protein L27, mitochondrial.
   
   0.515
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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