Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107559713Protein HGH1 homolog. (267 aa)    
Predicted Functional Partners:
Ttc4
Tetratricopeptide repeat protein 4.
   
 
 0.883
ENSSGRP00000030115
Tetratricopeptide repeat domain 4.
   
 
 0.883
ENSSGRP00000064194
NIN1 (RPN12) binding protein 1 homolog.
   
  
 0.802
Nob1
RNA-binding protein NOB1.
   
  
 0.802
rpf2
Ribosome production factor 2 homolog.
   
    0.768
LOC107583586
U3 small nucleolar RNA-associated protein 5.
   
   0.762
LOC107583058
U3 small nucleolar RNA-associated protein 5.
   
   0.762
ENSSGRP00000027910
annotation not available
   
   0.759
Cct6a
T-complex protein 1 subunit zeta.
   
   0.759
ENSSGRP00000061315
LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog.
   
   0.743
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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