ENSSGRP00000011565 protein (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSGRP00000011565

annotation not available (427 aa)

Predicted Functional Partners:

ENSSGRP00000050564

0.737

LOC107549241

0.737

LOC107555594

0.711

ENSSGRP00000052002

0.711

ENSSGRP00000027677

0.646

LOC107592405

0.646

carf

0.629

ENSSGRP00000029226

0.617

ENSSGRP00000029227

0.617

ENSSGRP00000030359

0.617

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000011565	ENSSGRP00000027677	ENSSGRP00000011565	ENSSGRP00000027677	annotation not available	Elastase 3 like.	0.646
ENSSGRP00000011565	ENSSGRP00000029226	ENSSGRP00000011565	ENSSGRP00000029226	annotation not available	Zgc:112285.	0.617
ENSSGRP00000011565	ENSSGRP00000029227	ENSSGRP00000011565	ENSSGRP00000029227	annotation not available	Zgc:112285.	0.617
ENSSGRP00000011565	ENSSGRP00000030359	ENSSGRP00000011565	ENSSGRP00000030359	annotation not available	Zgc:112285.	0.617
ENSSGRP00000011565	ENSSGRP00000050564	ENSSGRP00000011565	ENSSGRP00000050564	annotation not available	Chymotrypsin-C-like.	0.737
ENSSGRP00000011565	ENSSGRP00000052002	ENSSGRP00000011565	ENSSGRP00000052002	annotation not available	Elastase 2.	0.711
ENSSGRP00000011565	LOC107549241	ENSSGRP00000011565	ENSSGRP00000051746	annotation not available	Chymotrypsin-like elastase family member 2A.	0.737
ENSSGRP00000011565	LOC107555594	ENSSGRP00000011565	ENSSGRP00000050561	annotation not available	Chymotrypsin-like elastase family member 2A.	0.711
ENSSGRP00000011565	LOC107592405	ENSSGRP00000011565	ENSSGRP00000088514	annotation not available	Chymotrypsin-like elastase family member 2A.	0.646
ENSSGRP00000011565	carf	ENSSGRP00000011565	ENSSGRP00000110405	annotation not available	Calcium-responsive transcription factor.	0.629
ENSSGRP00000027677	ENSSGRP00000011565	ENSSGRP00000027677	ENSSGRP00000011565	Elastase 3 like.	annotation not available	0.646
ENSSGRP00000029226	ENSSGRP00000011565	ENSSGRP00000029226	ENSSGRP00000011565	Zgc:112285.	annotation not available	0.617
ENSSGRP00000029227	ENSSGRP00000011565	ENSSGRP00000029227	ENSSGRP00000011565	Zgc:112285.	annotation not available	0.617
ENSSGRP00000030359	ENSSGRP00000011565	ENSSGRP00000030359	ENSSGRP00000011565	Zgc:112285.	annotation not available	0.617
ENSSGRP00000050564	ENSSGRP00000011565	ENSSGRP00000050564	ENSSGRP00000011565	Chymotrypsin-C-like.	annotation not available	0.737
ENSSGRP00000052002	ENSSGRP00000011565	ENSSGRP00000052002	ENSSGRP00000011565	Elastase 2.	annotation not available	0.711
LOC107549241	ENSSGRP00000011565	ENSSGRP00000051746	ENSSGRP00000011565	Chymotrypsin-like elastase family member 2A.	annotation not available	0.737
LOC107555594	ENSSGRP00000011565	ENSSGRP00000050561	ENSSGRP00000011565	Chymotrypsin-like elastase family member 2A.	annotation not available	0.711
LOC107592405	ENSSGRP00000011565	ENSSGRP00000088514	ENSSGRP00000011565	Chymotrypsin-like elastase family member 2A.	annotation not available	0.646
carf	ENSSGRP00000011565	ENSSGRP00000110405	ENSSGRP00000011565	Calcium-responsive transcription factor.	annotation not available	0.629