STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011601threonyl-tRNA synthetase 1. (448 aa)    
Predicted Functional Partners:
mrpl15
39S ribosomal protein L15, mitochondrial.
   
 
 0.879
Yars
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.877
ENSSGRP00000102125
Tyrosine--tRNA ligase, cytoplasmic-like.
  
 
 0.877
mrpl58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
 
 0.862
Mrpl21
39S ribosomal protein L21, mitochondrial.
  
 
 0.859
mrpl3
39S ribosomal protein L3, mitochondrial isoform X1.
   
 
 0.857
LOC107569008
Bifunctional glutamate/proline--tRNA ligase-like.
  
 
 0.837
ENSSGRP00000108769
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
  
 
 0.837
ENSSGRP00000004214
Translation initiation factor IF-2, mitochondrial-like.
  
 0.823
ENSSGRP00000081244
Mitochondrial translational initiation factor 2.
  
 0.823
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.