STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011608Protein FAM60A-like. (207 aa)    
Predicted Functional Partners:
ENSSGRP00000079712
annotation not available
    
 
 0.820
SAP30L
Histone deacetylase complex subunit SAP30L-like.
    
 
 0.820
ENSSGRP00000034824
Histone deacetylase complex subunit SAP130-like isoform X1.
    
 
 0.796
ENSSGRP00000037942
Histone deacetylase complex subunit SAP130-like.
    
 
 0.796
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
   
 
 0.788
ENSSGRP00000033442
Breast cancer metastasis-suppressor 1 and related proteins.
    
 
 0.736
ENSSGRP00000072271
BRMS1 transcriptional repressor and anoikis regulator.
    
 
 0.736
ENSSGRP00000072273
BRMS1 transcriptional repressor and anoikis regulator.
    
 
 0.736
Sap130
Histone deacetylase complex subunit SAP130.
    
 
 0.733
ENSSGRP00000105660
Histone deacetylase complex subunit SAP130-like.
    
 
 0.733
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.