STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011614Ribonuclease ZC3H12A-like. (567 aa)    
Predicted Functional Partners:
ENSSGRP00000044133
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.730
LOC107561568
TRAF family member-associated NF-kappa-B activator-like isoform X1.
   
 
 0.592
LOC107563834
TRAF family member-associated NF-kappa-B activator-like isoform X1.
   
 
 0.592
ENSSGRP00000002744
Ring finger and CCCH-type domains 1a.
      
 0.585
LOC107588069
RING finger and CCCH-type zinc finger domain-containing protein.
      
 0.585
ENSSGRP00000012751
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta.
   
 
 0.575
ENSSGRP00000024525
Inhibitor of nuclear factor kappa-B kinase subunit gamma.
    
  0.545
ENSSGRP00000025684
Proline-serine-threonine phosphatase-interacting protein 1-like.
      
 0.489
ENSSGRP00000066456
Proline-serine-threonine phosphatase-interacting protein 1-like.
      
 0.489
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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