STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107565653Lectin, mannose-binding 2-like. (336 aa)    
Predicted Functional Partners:
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 0.820
LOC107550417
Transmembrane emp24 domain-containing protein 10-like.
   
 0.750
LOC107593259
Transmembrane protein Tmp21-like.
   
 0.750
ENSSGRP00000085295
Golgi SNAP receptor complex member 2-like.
   
 
 0.719
ENSSGRP00000100990
Golgi SNAP receptor complex member 2.
   
 
 0.719
ENSSGRP00000008659
Bet1 golgi vesicular membrane trafficking protein.
   
 
 0.718
bet1
Blocked early in transport 1.
   
 
 0.718
ENSSGRP00000039008
Lectin, mannose-binding 1.
    
0.710
ENSSGRP00000098896
Lectin, mannose-binding, 1.
    
0.710
LOC107562731
Protein transport protein SEC13.
   
 0.692
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.