Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107565654WW domain-binding protein 1-like. (238 aa)    
Predicted Functional Partners:
Actr5
Actin-related protein 5.
    
 0.855
LOC107594971
Actin-related protein 8.
   
 0.807
ENSSGRP00000041457
Actin related protein 8.
   
 0.807
LOC107596621
INO80 complex subunit C-like.
    
 0.783
LOC107593731
INO80 complex subunit C-like.
    
 0.783
LOC107584430
RuvB-like protein 1 (pontin 52).
    
 0.776
LOC107568195
RuvB-like protein 1 (pontin 52).
    
 0.776
Vopp1
Vesicular, overexpressed in cancer, prosurvival protein 1.
      
 0.736
ENSSGRP00000112820
Vesicular, overexpressed in cancer, prosurvival protein 1-like.
      
 0.736
ENSSGRP00000072081
Cysteine/tyrosine-rich 1.
      
 0.714
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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