Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011634E3 ubiquitin-protein ligase RNF103-like. (317 aa)    
Predicted Functional Partners:
Mlkl
Mixed lineage kinase domain-like protein isoform X1.
    
  0.843
LOC107552765
Charged multivesicular body protein 2A.
   
 
  0.788
LOC107582752
Charged multivesicular body protein 2a-like.
   
 
  0.788
LOC107559457
Charged multivesicular body protein 7-like.
     
  0.782
ENSSGRP00000084756
annotation not available
     
  0.782
LOC107558945
Charged multivesicular body protein 5-like.
     
  0.760
LOC107558965
Charged multivesicular body protein 5.
     
  0.760
LOC107586329
Charged multivesicular body protein 5-like.
     
  0.760
LOC107553259
UBX domain-containing protein 7-like.
   
   0.642
LOC107563300
UBX domain-containing protein 7-like isoform X1.
   
   0.642
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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