Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSSGRP00000011648ADP-ribosylation factor-like protein 3. (188 aa)    
Predicted Functional Partners:
ENSSGRP00000021136
RP2 activator of ARL3 GTPase.
    
 0.932
rp2
Protein XRP2.
    
 0.932
Cfap36
Cilia- and flagella-associated protein 36.
   
 
 0.888
PDE6D
Phosphodiesterase 6D.
   
 0.887
LOC107590678
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta-like.
   
 0.887
LOC107548572
Protein unc-119 homolog A-like isoform X1.
    
 0.879
ENSSGRP00000091384
Protein unc-119 homolog A-like.
    
 0.879
ENSSGRP00000108893
Uncharacterized protein LOC107587222 isoform X1.
    
 0.879
LOC107601434
Tubulin-specific chaperone C-like.
    
 0.809
ENSSGRP00000034157
Tubulin-specific chaperone C-like.
    
 0.809
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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