STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107578469Sestrin-2-like. (394 aa)    
Predicted Functional Partners:
ENSSGRP00000011510
WD repeat-containing protein 24-like.
    
 0.980
wdr24
WD repeat-containing protein 24 isoform X1.
    
 0.980
ENSSGRP00000108106
WD repeat-containing protein mio-like.
    
 0.978
ENSSGRP00000064175
WD repeat-containing protein 59-like.
    
 0.973
wdr59
WD repeat-containing protein 59 isoform X1.
    
 0.973
seh1l
Nucleoporin SEH1 isoform X1.
     
 0.962
LOC107562731
Protein transport protein SEC13.
    
 0.959
LOC107557974
Protein transport protein SEC13.
    
 0.959
ENSSGRP00000066073
Nucleoporin seh1-like.
     
 0.957
LOC107593595
Sestrin-2-like.
  
  
 
0.900
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.