Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011667NLR family CARD domain-containing protein 3. (1114 aa)    
Predicted Functional Partners:
ENSSGRP00000032865
NACHT and WD repeat domain containing 1.
    
 
 0.644
ENSSGRP00000101143
NACHT and WD repeat domain containing 1.
    
 
 0.644
ENSSGRP00000069012
NACHT, LRR and PYD domains-containing protein 3-like.
      
 0.518
ENSSGRP00000089535
NACHT, LRR and PYD domains-containing protein 1a-like.
      
 0.518
ENSSGRP00000094628
NACHT, LRR and PYD domains-containing protein 1.
      
 0.518
ENSSGRP00000101758
Myosin-IIIb-like.
      
 0.514
LOC107567173
Protein NLRC3-like.
      
 0.496
LOC107548199
Protein NLRC3-like.
      
 0.496
ENSSGRP00000011528
WD repeat domain 90.
   
   0.483
NWD2
NACHT and WD repeat domain-containing protein 2-like.
    
 
 0.469
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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