Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011682Si:ch211-193l2.10. (173 aa)    
Predicted Functional Partners:
CFAP61
Cilia and flagella associated protein 61.
    
 
 0.886
ENSSGRP00000006341
annotation not available
    
 
 0.886
ENSSGRP00000054034
Si:zfos-223e1.2.
    
 
 0.886
ENSSGRP00000004263
Si:ch211-248e11.2.
    
   0.885
ENSSGRP00000089112
annotation not available
    
   0.885
LOC107549965
Uncharacterized protein C1orf194 homolog.
    
   0.875
ENSSGRP00000061925
annotation not available
    
 
 0.842
tekt2
Tektin-2.
    
 
 0.842
EFHC1
EF-hand domain-containing protein 1-like.
    
 
 0.834
ENSSGRP00000111375
EF-hand domain-containing protein 1-like.
    
 
 0.834
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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