STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107554346Zinc finger and BTB domain-containing protein 22-like. (677 aa)    
Predicted Functional Partners:
Hsd17b8
Estradiol 17-beta-dehydrogenase 8.
    
 
 0.652
ENSSGRP00000011056
TAP binding protein (tapasin).
  
 0.644
ENSSGRP00000015068
annotation not available
  
 0.623
ENSSGRP00000088919
annotation not available
  
 0.614
LOC107554345
Death domain-associated protein 6-like.
  
 
 0.605
LOC107549841
Death domain-associated protein 6-like isoform X1.
  
 
 0.599
ENSSGRP00000036499
Solute carrier family 38 member 8a.
    
 0.554
ENSSGRP00000011707
Carboxy-terminal kinesin 2-like.
   
 
 0.537
LOC107549825
Carboxy-terminal kinesin 2-like.
   
 
 0.537
ENSSGRP00000027208
TAP binding protein (tapasin).
   
 0.518
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.