STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107570133Dickkopf-related protein 1-like isoform X1. (245 aa)    
Predicted Functional Partners:
LOC107583137
Low-density lipoprotein receptor-related protein 5-like.
    
 0.981
ENSSGRP00000071057
Low-density lipoprotein receptor-related protein 5-like.
    
 0.981
ENSSGRP00000000202
Kremen protein 1-like.
    
 0.894
LOC107560966
Kremen protein 1-like isoform X1.
    
 0.894
ENSSGRP00000038174
Low density lipoprotein receptor-related protein 6.
    
 0.855
ENSSGRP00000052324
annotation not available
    
 0.855
ENSSGRP00000012084
annotation not available
    
 0.824
dkk2
Dickkopf-related protein 2.
     
0.655
LOC107569106
Cytoskeleton-associated protein 4.
   
 
 0.652
LOC107570993
Catenin beta-1 isoform X1.
   
 
 0.614
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.