STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo1dUnconventional myosin-Id. (1008 aa)    
Predicted Functional Partners:
polr1e
DNA-directed RNA polymerase I subunit RPA49.
    
  0.612
baz1b
Bromodomain adjacent to zinc finger domain protein 1B.
    
  0.596
ENSSGRP00000079486
Bromodomain adjacent to zinc finger domain, 1B.
    
  0.596
calm2
Calmodulin.
    
 0.588
calm2-2
Calmodulin.
    
 0.588
calm2-3
Calmodulin.
    
 0.588
calm2-4
Calmodulin.
    
 0.588
calm2-5
Calmodulin.
    
 0.588
LOC107597846
Calmodulin-like.
    
 0.588
calm2-6
Calmodulin.
    
 0.588
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.