Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011728Protein SCAI-like. (506 aa)    
Predicted Functional Partners:
ENSSGRP00000042825
AT-hook DNA-binding motif-containing protein 1-like.
    
 
 0.801
ENSSGRP00000095047
AT-hook DNA-binding motif-containing protein 1-like.
    
 
 0.801
ENSSGRP00000034364
annotation not available
      
 0.571
LOC107552258-2
U6 snRNA-associated Sm-like protein LSm2.
      
 0.571
uprt
Uracil phosphoribosyltransferase homolog.
      
 0.571
LOC107553857
39S ribosomal protein L23, mitochondrial.
      
 0.537
ENSSGRP00000069281
39S ribosomal protein L23, mitochondrial-like.
      
 0.537
LOC107581954
Solute carrier family 25 (mitochondrial carrier), member 14/30.
      
 0.534
ENSSGRP00000108724
Solute carrier family 25 (mitochondrial carrier), member 14/30.
      
 0.534
ENSSGRP00000018198
Serum response factor-like.
     
  0.531
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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