STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011728Protein SCAI-like. (506 aa)    
Predicted Functional Partners:
LOC107553857
39S ribosomal protein L23, mitochondrial.
      
 0.627
ENSSGRP00000069281
39S ribosomal protein L23, mitochondrial-like.
      
 0.627
eef1akmt2
Protein-lysine N-methyltransferase METTL10.
      
 0.607
ENSSGRP00000085827
EEF1A lysine methyltransferase 2.
      
 0.607
ENSSGRP00000041033
LEO1 homolog, Paf1/RNA polymerase II complex component.
      
 0.526
leo1
RNA polymerase-associated protein LEO1.
      
 0.526
Brca2
Breast cancer type 2 susceptibility protein isoform X1.
      
 0.502
ENSSGRP00000071274
Breast cancer type 2 susceptibility protein homolog.
      
 0.502
ENSSGRP00000042825
AT-hook DNA-binding motif-containing protein 1-like.
    
 
 0.450
ENSSGRP00000095047
AT-hook DNA-binding motif-containing protein 1-like.
    
 
 0.450
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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