STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107578520Luc7-like protein 3. (228 aa)    
Predicted Functional Partners:
ENSSGRP00000012254
annotation not available
   
 0.911
LOC107588581
RNA-binding protein 25-like.
   
 0.911
ENSSGRP00000069786
RNA binding motif protein 25a.
   
 0.911
ENSSGRP00000073400
RNA binding motif protein 25b.
   
 0.911
Rbm25
RNA-binding protein 25.
   
 0.911
ENSSGRP00000094727
RNA binding motif protein 25b.
   
 0.911
pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
  
 0.887
LOC107587767
Arginine/serine-rich protein PNISR-like isoform X1.
   
  
 0.887
ENSSGRP00000005325
annotation not available
    
 0.834
SART1
U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.834
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.