STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011768Syntaxin-12-like. (199 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs homolog 1A-like.
   
 0.912
LOC107566351
Vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1.
   
 0.912
ENSSGRP00000008867
annotation not available
   
 0.911
Ykt6
Synaptobrevin homolog YKT6.
   
 0.911
LOC107602234
Synaptobrevin homolog YKT6.
   
 0.911
LOC107587315
Vesicle-associated membrane protein 8-like.
   
 0.890
LOC107594988
Vesicle-associated membrane protein 8-like.
   
 0.890
LOC107569362
Syntaxin-8-like isoform X1.
    
 0.886
LOC107555374
Syntaxin-8-like.
    
 0.886
ENSSGRP00000062930
Vacuolar protein sorting-associated protein 16 homolog isoform X1.
    
 
 0.877
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.