Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmod4Tropomodulin-4 isoform X1. (325 aa)    
Predicted Functional Partners:
ENSSGRP00000006595
Tropomodulin-1-like.
     
  0.818
ENSSGRP00000041025
Tropomodulin 2.
     
  0.818
LOC107550632
Tropomodulin-2-like.
     
  0.818
tmod1
Tropomodulin-1 isoform X1.
     
  0.818
ENSSGRP00000068393
Nebulin.
   
 0.758
ENSSGRP00000110752
Nebulin-like.
   
 0.758
LOC107572193
Tropomyosin beta chain.
   
 0.744
ENSSGRP00000068532
Tropomyosin 2 (beta).
   
 0.744
LOC107555938
Myosin light chain 1, skeletal muscle isoform-like.
   
 
 0.731
LOC107596080
Myosin light chain 1, skeletal muscle isoform-like.
   
 
 0.731
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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