STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps72Vacuolar protein sorting-associated protein 72 homolog. (385 aa)    
Predicted Functional Partners:
znhit1
Zinc finger HIT domain-containing protein 1.
    
 
 0.960
LOC107584430
RuvB-like protein 1 (pontin 52).
    
 0.956
LOC107568195
RuvB-like protein 1 (pontin 52).
    
 0.956
LOC107585836
DNA methyltransferase 1-associated protein 1-like.
    
 0.954
LOC107548533
DNA methyltransferase 1-associated protein 1-like.
    
 0.954
ENSSGRP00000018702
RuvB-like protein 2.
    
 0.949
LOC107597476
ruvB-like 2.
    
 0.949
LOC107555875
YEATS domain-containing protein 4.
    
 0.940
LOC107590554
YEATS domain-containing protein 4-like.
    
 0.940
LOC107583909
Mortality factor 4-like protein 1.
    
 0.907
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.