Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vps72Vacuolar protein sorting-associated protein 72 homolog. (385 aa)    
Predicted Functional Partners:
LOC107555875
YEATS domain-containing protein 4.
   
 0.945
LOC107590554
YEATS domain-containing protein 4-like.
   
 0.945
LOC107585836
DNA methyltransferase 1-associated protein 1-like.
   
 0.942
LOC107548533
DNA methyltransferase 1-associated protein 1-like.
   
 0.942
ENSSGRP00000018702
RuvB-like protein 2.
    
 0.940
LOC107597476
ruvB-like 2.
    
 0.940
LOC107584430
RuvB-like protein 1 (pontin 52).
    
 0.940
LOC107568195
RuvB-like protein 1 (pontin 52).
    
 0.940
ENSSGRP00000012988
Transformation/transcription domain-associated protein-like.
    
 0.937
ENSSGRP00000067675
Transformation/transcription domain-associated protein-like.
    
 0.937
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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