STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011797Anti-dorsalizing morphogenic protein. (115 aa)    
Predicted Functional Partners:
LOC107561023
Growth factor receptor-binding protein 2.
      
 0.660
tgfbi
Transforming growth factor-beta-induced protein ig-h3.
   
  
 0.515
bglap
Osteocalcin.
      
 0.504
LOC107580985
Noggin-2-like.
    
 0.439
LOC107556646
Noggin-2.
    
 0.439
ENSSGRP00000064974
Noggin-2-like.
    
 0.439
ENSSGRP00000029050
poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.437
Xpo5
Exportin-5.
     
 0.421
ENSSGRP00000056826
Microprocessor complex subunit DGCR8-like.
      
 0.415
LOC107592303
Microprocessor complex subunit DGCR8-like.
      
 0.415
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.