STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107571783Probable E3 ubiquitin-protein ligase DTX3 isoform X1. (384 aa)    
Predicted Functional Partners:
ENSSGRP00000048421
Neurogenic locus notch homolog protein 1.
    
 0.742
Notch1
Neurogenic locus notch homolog protein 1.
    
 0.742
LOC107591241
Protein FAM162B-like.
   
 0.726
ENSSGRP00000068994
poly(ADP-ribose) polymerase family member 9.
   
 0.726
ENSSGRP00000068996
annotation not available
   
 0.726
ENSSGRP00000088839
Protein FAM162B-like.
   
 0.726
ENSSGRP00000068938
Neurogenic locus notch homolog protein 1-like isoform X1.
    
 0.715
ENSSGRP00000083567
Neurogenic locus notch homolog protein 2-like isoform X1.
    
 0.690
LOC107548805
Neurogenic locus notch homolog protein 2-like.
    
 0.683
LOC107579587
Poly [ADP-ribose] polymerase 14-like.
   
 0.636
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.