STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011807annotation not available (105 aa)    
Predicted Functional Partners:
ENSSGRP00000087862
annotation not available
    
 0.988
LOC107553781
Interleukin-8-like.
    
 0.939
LOC107588617
Stromal cell-derived factor 1-like isoform X1.
    
 0.908
LOC107566675
Stromal cell-derived factor 1-like.
    
 0.908
ENSSGRP00000089853
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.908
LOC107566036
Stromal cell-derived factor 1-like.
    
 0.908
LOC107599130
Monocyte chemotactic protein 1B-like.
    
 0.814
LOC107599641
C-C motif chemokine 19-like.
    
 0.814
LOC107584769
C-C chemokine receptor type 7-like.
    
 0.802
LOC107581378
C-C chemokine receptor type 7-like.
    
 0.802
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.