LOC107552723 protein (Sinocyclocheilus grahami)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC107552723

C-C motif chemokine 25-like. (102 aa)

Predicted Functional Partners:

ENSSGRP00000066745

0.974

LOC107579348

0.962

LOC107557055

0.962

ENSSGRP00000059875

0.962

ENSSGRP00000015615

0.960

ENSSGRP00000048287

0.960

LOC107598201

0.957

LOC107554725

0.957

ENSSGRP00000087862

0.901

LOC107584769

0.884

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000015615	ENSSGRP00000059875	ENSSGRP00000015615	ENSSGRP00000059875	C-C chemokine receptor type 9-like.	Chemokine (C-C motif) receptor 9a.	0.815
ENSSGRP00000015615	ENSSGRP00000066745	ENSSGRP00000015615	ENSSGRP00000066745	C-C chemokine receptor type 9-like.	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000015615	ENSSGRP00000087862	ENSSGRP00000015615	ENSSGRP00000087862	C-C chemokine receptor type 9-like.	annotation not available	0.741
ENSSGRP00000015615	LOC107552723	ENSSGRP00000015615	ENSSGRP00000011808	C-C chemokine receptor type 9-like.	C-C motif chemokine 25-like.	0.960
ENSSGRP00000015615	LOC107554725	ENSSGRP00000015615	ENSSGRP00000096222	C-C chemokine receptor type 9-like.	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000015615	LOC107557055	ENSSGRP00000015615	ENSSGRP00000059874	C-C chemokine receptor type 9-like.	C-C chemokine receptor type 9-like.	0.815
ENSSGRP00000015615	LOC107579348	ENSSGRP00000015615	ENSSGRP00000002485	C-C chemokine receptor type 9-like.	C-C chemokine receptor type 9-like.	0.815
ENSSGRP00000015615	LOC107598201	ENSSGRP00000015615	ENSSGRP00000014829	C-C chemokine receptor type 9-like.	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000048287	ENSSGRP00000059875	ENSSGRP00000048287	ENSSGRP00000059875	annotation not available	Chemokine (C-C motif) receptor 9a.	0.815
ENSSGRP00000048287	ENSSGRP00000066745	ENSSGRP00000048287	ENSSGRP00000066745	annotation not available	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000048287	ENSSGRP00000087862	ENSSGRP00000048287	ENSSGRP00000087862	annotation not available	annotation not available	0.741
ENSSGRP00000048287	LOC107552723	ENSSGRP00000048287	ENSSGRP00000011808	annotation not available	C-C motif chemokine 25-like.	0.960
ENSSGRP00000048287	LOC107554725	ENSSGRP00000048287	ENSSGRP00000096222	annotation not available	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000048287	LOC107557055	ENSSGRP00000048287	ENSSGRP00000059874	annotation not available	C-C chemokine receptor type 9-like.	0.815
ENSSGRP00000048287	LOC107579348	ENSSGRP00000048287	ENSSGRP00000002485	annotation not available	C-C chemokine receptor type 9-like.	0.815
ENSSGRP00000048287	LOC107598201	ENSSGRP00000048287	ENSSGRP00000014829	annotation not available	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000059875	ENSSGRP00000015615	ENSSGRP00000059875	ENSSGRP00000015615	Chemokine (C-C motif) receptor 9a.	C-C chemokine receptor type 9-like.	0.815
ENSSGRP00000059875	ENSSGRP00000048287	ENSSGRP00000059875	ENSSGRP00000048287	Chemokine (C-C motif) receptor 9a.	annotation not available	0.815
ENSSGRP00000059875	ENSSGRP00000066745	ENSSGRP00000059875	ENSSGRP00000066745	Chemokine (C-C motif) receptor 9a.	Atypical chemokine receptor 4-like.	0.688
ENSSGRP00000059875	ENSSGRP00000087862	ENSSGRP00000059875	ENSSGRP00000087862	Chemokine (C-C motif) receptor 9a.	annotation not available	0.741