Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
exosc7Exosome complex component RRP42. (295 aa)    
Predicted Functional Partners:
ENSSGRP00000010953
Exosome complex component RRP41-like.
  
 0.999
Exosc2
Exosome complex component RRP4.
   
 0.999
ENSSGRP00000013485
annotation not available
  
 0.998
LOC107586042
Exosome complex component MTR3.
 
 0.998
exosc5
Exosome complex component RRP46.
  
 0.998
ENSSGRP00000049016
Exosome component 1.
   
 0.998
LOC107593174
Exosome complex component MTR3-like.
 
 0.998
EXOSC3
Exosome complex component RRP40.
  
 0.998
LOC107594272
Exosome complex component CSL4-like.
   
 0.998
ENSSGRP00000105544
Exosome component 5.
  
 0.998
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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