Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP10Cdc42-interacting protein 4 homolog. (459 aa)    
Predicted Functional Partners:
ENSSGRP00000004211
annotation not available
    
 0.903
cdc42
Cell division control protein 42 homolog isoform X1.
    
 0.903
ENSSGRP00000079890
Cell division control protein 42 homolog isoform X1.
    
 0.903
LOC107580157
Cdc42 homolog.
    
 0.834
LOC107552852
Cell division control protein 42 homolog isoform X1.
    
 0.834
ENSSGRP00000012934
Intersectin 2a.
   
 0.818
ENSSGRP00000074134
Intersectin-2-like.
   
 0.818
ENSSGRP00000084141
Intersectin 2b.
   
 0.818
LOC107594821
Intersectin-2-like isoform X1.
   
 0.818
nckipsd
NCK-interacting protein with SH3 domain isoform X1.
    
 
 0.814
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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