Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011841C-type lectin domain family 3, member Bb. (151 aa)    
Predicted Functional Partners:
ENSSGRP00000007359
annotation not available
   
 0.674
ENSSGRP00000041018
annotation not available
   
 0.674
LOC107588827
Secreted phosphoprotein 24-like.
   
 
 0.652
LOC107596687
Extracellular matrix protein 1-like.
   
 
 0.621
ENSSGRP00000066206
Extracellular matrix protein 1b.
   
 
 0.621
tnn
Tenascin-N isoform X1.
    
 0.523
ENSSGRP00000064359
Tenascin N.
    
 0.523
ENSSGRP00000095879
Inter-alpha-trypsin inhibitor heavy chain H5-like.
   
 0.506
ENSSGRP00000001871
Tenascin C.
    
  0.488
ENSSGRP00000009821
Zmp:0000000846.
    
  0.488
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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