Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011846annotation not available (705 aa)    
Predicted Functional Partners:
LOC107590868
Armadillo repeat-containing protein 10-like.
      
 0.486
armc10
Armadillo repeat-containing protein 10.
      
 0.486
Plgrkt
Plasminogen receptor (KT).
      
 0.455
CCR8
C-C chemokine receptor type 5-like.
      
 0.431
ENSSGRP00000028412
C-C chemokine receptor type 5-like.
      
 0.431
LOC107601667
C-C chemokine receptor type 5-like.
      
 0.431
LOC107561957
LanC-like protein 2.
      
 0.416
ENSSGRP00000112824
LanC-like protein 2.
      
 0.416
LOC107551206
C-C chemokine receptor type 4-like.
      
 0.412
ENSSGRP00000069928
C-C chemokine receptor type 4-like.
      
 0.412
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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