Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnf130E3 ubiquitin-protein ligase RNF130 isoform X1. (428 aa)    
Predicted Functional Partners:
ENSSGRP00000083272
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.709
ENSSGRP00000106616
annotation not available
    
 0.709
LOC107553259
UBX domain-containing protein 7-like.
   
   0.642
LOC107563300
UBX domain-containing protein 7-like isoform X1.
   
   0.642
LOC107597474
OCIA domain-containing protein 2-like.
      
 0.610
APMAP
Adipocyte plasma membrane-associated protein-like isoform X1.
      
 0.580
LOC107564208
Adipocyte plasma membrane-associated protein.
      
 0.580
cutc
Copper homeostasis protein cutC homolog.
      
 0.572
LOC107562621
Uncharacterized protein C20orf24 homolog.
      
 0.571
fibp
Acidic fibroblast growth factor intracellular-binding protein.
    
 
 0.571
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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