Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107565655PH and SEC7 domain-containing protein 1-like. (945 aa)    
Predicted Functional Partners:
ENSSGRP00000010201
annotation not available
    
 
 0.578
LOC107574486
ADP-ribosylation factor 6-like.
    
 
 0.578
ENSSGRP00000048468
ADP-ribosylation factor 6b.
    
 
 0.578
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.543
ENSSGRP00000041867
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like.
     
 0.543
ENSSGRP00000079802
annotation not available
     
 0.543
ENSSGRP00000023467
LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like.
     
  0.456
LOC107595140
Brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1.
     
  0.456
LOC107584936
Brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1.
     
  0.456
LOC107602738
Transcription factor LBX1-like.
      
 0.447
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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