STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011869Protein jagged-1b. (1161 aa)    
Predicted Functional Partners:
ENSSGRP00000083567
Neurogenic locus notch homolog protein 2-like isoform X1.
   
0.960
ENSSGRP00000048421
Neurogenic locus notch homolog protein 1.
   
0.942
Notch1
Neurogenic locus notch homolog protein 1.
   
0.942
ENSSGRP00000068938
Neurogenic locus notch homolog protein 1-like isoform X1.
   
0.939
ENSSGRP00000003434
Protein jagged-1a.
  
  
 
0.901
LOC107585528
Protein jagged-1b-like.
  
  
 
0.900
ENSSGRP00000005304
Neurogenic locus notch homolog protein 1-like.
   
 0.842
ENSSGRP00000005459
Neurogenic locus notch homolog protein 1-like.
   
0.842
ENSSGRP00000109007
Notch receptor 1b.
   
0.833
LOC107548805
Neurogenic locus notch homolog protein 2-like.
   
0.826
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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