STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592020Calcium-transporting ATPase type 2C member 1 isoform X1. (922 aa)    
Predicted Functional Partners:
ENSSGRP00000060664
annotation not available
   
  
 0.644
LOC107577258
Cardiac phospholamban-like.
   
 0.639
ENSSGRP00000060674
Si:ch211-270g19.5.
   
 0.639
PLN
Cardiac phospholamban-like.
   
 0.639
ENSSGRP00000071166
Si:ch211-270g19.5.
   
 0.639
ENSSGRP00000100507
Plasma membrane calcium-transporting ATPase 1-like.
  
 
0.601
ENSSGRP00000011491
annotation not available
  
 
0.600
LOC107570616
Plasma membrane calcium-transporting ATPase 2-like isoform X1.
  
 
0.599
LOC107561799
Plasma membrane calcium-transporting ATPase 2 isoform X1.
  
 
0.599
ENSSGRP00000091901
ATPase plasma membrane Ca2+ transporting 4.
  
 
0.598
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.