STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011882UBX domain protein 11. (267 aa)    
Predicted Functional Partners:
LOC107553259
UBX domain-containing protein 7-like.
    
 
 0.988
LOC107563300
UBX domain-containing protein 7-like isoform X1.
    
 
 0.988
LOC107549730
Phospholipase A-2-activating protein-like.
    
 
 0.872
ENSSGRP00000074659
Phospholipase A2-activating protein.
    
 
 0.872
LOC107580473
Ubiquitin thioesterase OTU1.
   
 
 0.859
LOC107582461
Ubiquitin thioesterase OTU1-like.
   
 
 0.859
ENSSGRP00000018631
Zgc:136908.
   
 0.842
ENSSGRP00000046595
Transitional endoplasmic reticulum ATPase-like.
   
 0.842
LOC107594236
Transitional endoplasmic reticulum ATPase-like.
   
 0.842
spata5l1
Spermatogenesis-associated protein 5-like protein 1 isoform X1.
   
 0.842
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.