STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000011888Protein LYRIC-like isoform X1. (498 aa)    
Predicted Functional Partners:
ENSSGRP00000078715
Staphylococcal nuclease and tudor domain containing 1.
    
 
 0.909
ENSSGRP00000082423
annotation not available
    
 
 0.909
ENSSGRP00000101922
Zinc finger CCHC-type and RNA binding motif 1.
   
 
 0.630
ints9
Integrator complex subunit 9.
    
 0.625
ints7
LOW QUALITY PROTEIN: integrator complex subunit 7-like.
    
 0.588
ENSSGRP00000064102
Integrator complex subunit 10.
    
 0.568
Ints1
Integrator complex subunit 1.
    
 0.561
ENSSGRP00000050859
Integrator complex subunit 1-like.
    
 0.561
LOC107551040
Histone-binding protein N1/N2-like isoform X1.
   
  
 0.560
LOC107594614
Histone-binding protein N1/N2-like isoform X1.
   
  
 0.560
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.