STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592770Cathepsin B-like isoform X1. (330 aa)    
Predicted Functional Partners:
ENSSGRP00000008376
Cathepsin B-like.
  
  
 
0.901
ENSSGRP00000034520
LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like.
   
 
 0.901
ENSSGRP00000056785
NACHT, LRR and PYD domains-containing protein 3-like.
   
 
 0.901
ENSSGRP00000095425
NACHT, LRR and PYD domains-containing protein 3-like.
   
 
 0.901
ENSSGRP00000006432
Cathepsin B-like.
  
  
 
0.900
ENSSGRP00000069012
NACHT, LRR and PYD domains-containing protein 3-like.
   
 
  0.900
ENSSGRP00000071716
NACHT, LRR and PYD domains-containing protein 3-like.
     
  0.900
ENSSGRP00000004167
Cathepsin D-like.
   
 0.724
ctsd
Cathepsin D.
   
 0.724
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.687
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.