Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012017Fibronectin-like. (2208 aa)    
Predicted Functional Partners:
LOC107564862
Integrin beta-6-like.
   
 
 0.938
LOC107587566
Syndecan-4-like.
    
 0.928
LOC107595421
Syndecan-4-like.
    
 0.928
ITGA7
Integrin subunit alpha 7.
     
 0.914
ENSSGRP00000035958
Integrin alpha-5-like.
     
 0.903
ENSSGRP00000042345
Integrin alpha-5-like.
     
 0.903
Itgav
Integrin alpha V.
     
 0.880
ENSSGRP00000073113
Integrin, alpha V.
     
 0.880
ENSSGRP00000107238
annotation not available
     
 0.874
LOC107601382
Integrin beta-2-like.
   
 
 0.871
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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