STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr4a2Nuclear receptor subfamily 4 group A member 2 isoform X1. (588 aa)    
Predicted Functional Partners:
LOC107589551
Paired-like homeodomain transcription factor 3.
    
 
 0.617
LOC107582478
Paired-like homeodomain transcription factor 3.
    
 
 0.617
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
     
 0.561
Ncor2
Nuclear receptor corepressor 2 isoform X1.
    
 0.535
ENSSGRP00000088553
Nuclear receptor corepressor 1-like.
    
 0.535
ENSSGRP00000107292
Nuclear receptor corepressor 1-like.
    
 0.535
ENSSGRP00000112066
Nuclear receptor corepressor 2-like.
    
 0.535
LOC107564042
LIM homeobox transcription factor 1.
      
 0.489
LOC107550585
LIM homeobox transcription factor 1.
      
 0.489
ENSSGRP00000025472
annotation not available
    
 0.480
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.