STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582046INO80 complex subunit E-like isoform X1. (229 aa)    
Predicted Functional Partners:
Actr5
Actin-related protein 5.
    
 0.999
ENSSGRP00000071405
Nuclear factor related to kappa-B-binding protein-like.
    
 0.998
nfrkb
Nuclear factor related to kappa-B-binding protein isoform X1.
    
 0.998
ENSSGRP00000071666
INO80 complex ATPase subunit.
    
 0.997
ENSSGRP00000099779
DNA helicase INO80-like isoform X1.
    
 0.997
LOC107553541
INO80 complex subunit B-like.
   
 0.994
Ino80d
INO80 complex subunit D.
    
 0.989
ENSSGRP00000087339
INO80 complex subunit D-like.
    
 0.989
LOC107558624
TCF3 fusion partner-like.
   
 0.988
ENSSGRP00000073944
TCF3 fusion partner-like.
   
 0.988
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.