STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582048Uncharacterized protein LOC107582048. (711 aa)    
Predicted Functional Partners:
ENSSGRP00000047575
Extra spindle pole bodies like 1, separase.
   
 
 0.770
LOC107569179
Kinetochore protein NDC80 homolog.
   
  
 0.586
LOC107560547
Kinetochore protein NDC80 homolog.
   
  
 0.586
ENSSGRP00000075269
Ttk protein kinase.
   
  
 0.560
ENSSGRP00000088161
Ttk protein kinase.
   
  
 0.560
Nusap1
Nucleolar and spindle-associated protein 1 isoform X1.
   
  
 0.556
LOC107585493
Nucleolar and spindle-associated protein 1-like isoform X1.
   
  
 0.556
LOC107583496
Kinesin-like protein KIF11 isoform X1.
   
  
 0.556
ENSSGRP00000081948
Kinesin-like protein KIF11.
   
  
 0.556
LOC107598597
Centrosomal protein of 55 kDa-like.
   
  
 0.554
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.