Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107601875AP-3 complex subunit mu-1-like isoform X1. (418 aa)    
Predicted Functional Partners:
ENSSGRP00000003754
AP-3 complex subunit delta-1-like isoform X1.
   
 0.989
ENSSGRP00000062961
Adaptor related protein complex 3 subunit delta 1.
   
 0.989
ENSSGRP00000012191
AP-3 complex subunit sigma-2.
   
 0.982
LOC107581850
AP-3 complex subunit sigma-2-like.
   
 0.982
AP3B1
Adaptor related protein complex 3 subunit beta 1.
   
 0.980
AP3B1-2
Adaptor related protein complex 3 subunit beta 1.
   
 0.980
AP3B2
AP-3 complex subunit beta-2-like isoform X1.
   
 0.980
ENSSGRP00000085213
annotation not available
   
 0.980
ENSSGRP00000031125
AP-3 complex subunit sigma-1-like.
   
 0.976
LOC107566394
AP-3 complex subunit sigma-1 isoform X1.
   
 0.976
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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