STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107557702Epimerase family protein SDR39U1-like isoform X1. (302 aa)    
Predicted Functional Partners:
ENSSGRP00000077331
annotation not available
  
  
 0.666
ENSSGRP00000095179
Stomatin-like protein 1.
  
  
 0.666
ENSSGRP00000015616
annotation not available
      
 0.649
ENSSGRP00000012052
finTRIM family, member 66.
   
  
 0.634
ENSSGRP00000078078
finTRIM family, member 66.
   
  
 0.634
Xylb
Xylulose kinase.
      
 0.617
LOC107566356
Nicalin-1-like isoform X1.
      
 0.614
LOC107549377
Nicalin-1 isoform X1.
      
 0.614
fech
Protoporphyrin/coproporphyrin ferrochelatase.
  
  
 0.584
LOC107558693
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
  
 0.553
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.