STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012069Methyltransferase-like protein 17, mitochondrial. (454 aa)    
Predicted Functional Partners:
ENSSGRP00000011646
annotation not available
   
 
 0.986
Mrps10
28S ribosomal protein S10, mitochondrial.
    
 
 0.984
mrps35
28S ribosomal protein S35, mitochondrial.
    
 
 0.983
LOC107567169
28S ribosomal protein S12, mitochondrial-like.
   
 
 0.979
LOC107553320
28S ribosomal protein S5, mitochondrial-like.
    
 
 0.969
LOC107583531
28S ribosomal protein S5, mitochondrial-like.
    
 
 0.969
ENSSGRP00000021490
28S ribosomal protein S15, mitochondrial-like.
   
 
 0.928
ENSSGRP00000066612
Mitochondrial ribosomal protein S15.
   
 
 0.928
ENSSGRP00000006447
annotation not available
   
 
 0.916
mrps16
28S ribosomal protein S16, mitochondrial.
   
 
 0.916
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.