Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107557732Complement C1q-like protein 2. (234 aa)    
Predicted Functional Partners:
f7
Coagulation factor VII isoform X1.
     
 0.692
omp
Olfactory marker protein.
      
 0.566
LOC107583512
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 9.
      
 0.535
LOC107552997
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 9.
      
 0.535
ENSSGRP00000037867
annotation not available
    
 0.509
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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