Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC107573976Volume-regulated anion channel subunit LRRC8E-like isoform X1. (802 aa)    
Predicted Functional Partners:
LOC107564174
Protein tweety homolog 3.
      
 0.546
LOC107557961
Protein tweety homolog 3-like.
      
 0.546
ENSSGRP00000063359
Leucine rich repeat transmembrane neuronal 4 like 2.
  
     0.522
ENSSGRP00000053900
Leucine-rich repeat and transmembrane domain-containing protein 2-like.
  
 
  0.518
ENSSGRP00000012010
Biglycan-like.
  
     0.512
LOC107565639
Decorin-like.
  
     0.509
ENSSGRP00000030577
Protein tweety homolog 2-like.
      
 0.508
LOC107590186
Proline arginine-rich end leucine-rich repeat protein.
  
     0.508
ttyh2
Protein tweety homolog 2 isoform X1.
      
 0.508
aspn
Asporin.
  
     0.504
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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