Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Cdkn2dCyclin-dependent kinase 4 inhibitor D. (120 aa)    
Predicted Functional Partners:
LOC107581773
Cyclin-dependent kinase 6-like.
    
  0.976
ENSSGRP00000022639
Cyclin-dependent kinase 4.
    
 0.962
LOC107567936
Cyclin-dependent kinase 4-like isoform X1.
    
 0.962
LOC107558583
Cyclin-dependent kinase 6-like.
    
 0.959
LOC107567973
Cyclin-dependent kinase 6-like.
    
 0.959
ENSSGRP00000022146
Cyclin D3.
    
 0.939
ENSSGRP00000022148
G1/S-specific cyclin-D2-like.
    
 0.939
LOC107594473
G1/S-specific cyclin-D1-like.
    
 0.931
LOC107584710
G1/S-specific cyclin-D1.
    
 0.931
LOC107572660
G1/S-specific cyclin-D2-like.
    
 0.931
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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