STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000012103Mannose-binding protein C-like. (250 aa)    
Predicted Functional Partners:
ENSSGRP00000073907
Interleukin-1 beta-like.
   
  
 0.644
ENSSGRP00000000879
Wu:fd46c06.
   
 0.620
ENSSGRP00000031298
Interleukin-6-like.
      
 0.615
ENSSGRP00000012302
Complement factor I-like isoform X1.
   
 0.579
ENSSGRP00000012307
Complement factor I-like.
   
 0.579
C5
Complement component 5.
   
 0.497
LOC107586740
Mannan-binding lectin serine protease 1-like.
   
 0.494
LOC107582221
Mannan-binding lectin serine protease 1-like isoform X1.
   
 0.494
ENSSGRP00000020270
Mannan-binding lectin serine peptidase 2.
   
 0.480
ENSSGRP00000094940
annotation not available
   
 0.480
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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